CDS
| Accession Number | TCMCG065C26690 |
| gbkey | CDS |
| Protein Id | XP_012703196.1 |
| Location | complement(join(34850837..34851185,34851297..34851370,34851452..34851527,34851637..34851741,34851833..34851975,34852086..34852142,34852249..34852354,34852434..34852562,34852648..34852718,34852843..34852938,34853014..34853070,34853162..34853272,34853367..34853444,34853599..34853763,34853848..34853904,34854040..34854102,34854214..34854333,34854528..34854719,34854804..34854880,34855018..34855123,34855195..34855365)) |
| Gene | LOC101777938 |
| GeneID | 101777938 |
| Organism | Setaria italica |
Protein
| Length | 800aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_012847742.2 |
| Definition | 5'-3' exoribonuclease 4 isoform X1 [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | AL |
| Description | XRN 5'-3' exonuclease N-terminus |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12619
[VIEW IN KEGG] ko:K20553 [VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] ko03018 [VIEW IN KEGG] ko04016 [VIEW IN KEGG] map03008 [VIEW IN KEGG] map03018 [VIEW IN KEGG] map04016 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGATACCTTCTTTCTACAAGTGGCTCGTGACCAGATACCCAAGCATCGTCTCCCCCGCAAAGGAGGAACCAGAGGAGGGCATCATCTTCCACAACCTCTACCTCGACATGAACTGCATCATCCATCCTTGCTTCCACCCGCAGGACCAGATGCACGCAGACGTAGACGTGTGCCCTCCGACAACGGTCAGCGAGGTGTTGGAGTCCATGTTCGAGCACTTGGACCGCCTGTTCCGCATCATCAGGCCGACAAGGCTTCTCTACTTAGCCGTAGATGGCGTTGTTCCATGCGCCAAAATGAATCGAGTGCGACGGGGACGTTTCTACTCTGCCATGCTAGCCACAAGTGAGGCACTTGAAGAGGAAAAAATGCGGAGGGAATTAAGAGAGCAAGGTAAGGAGGTGCCACCGCGAGAGATTTCCGAGGTTTCTGACTCCAATGTCATCACACCAGGGACTGAGTTCATGGAGAAGCTGTCACAAGCGCTCGAGTACTACACCCGTTACAAATTGAATACTGACCCCGGGTGGAAAGACATTATGGTCATACTCTCTGATGCAAATGTGCCCGGAGAAGGAGAGCACAAGATCATGTCTTTCATCCGTGCGCAACGCAGCATGGAAGGCTATGACCCCAACACTCGACACTGCTTGTATGGGCATGATGCAGATTTGATAATGCTTGCTTTGGCATCTCACGAGGTCCACTTCTCTATTTTGCGTGAGGGTGTGCTACTCCCAAATCAGGCAGAAACCGAAGGGAATTCGGATAAACCATATCTGTTTTTGAACATATGGGTTCTGAGAGAGTACTTGGAGCTTGATTTGAAGATATTGGACCCAATTTGCGAGCCTGATATCGAGAGGCTAATAGATGACTTCATCTTTATTTGTTTCTTGATGGGAAATGATTTCATCCCACATATTCCATCACTTGAGACGCATGAGGGTGCAGTCCATCTTCTTTTGGAAGTGTACAAAACAACCTTCAACAAAATGGGAGGGTATATTGTCAACACAGATAAAGTGAAAGATAAACATGGTGCATATCTAGAAGTCTCAAGGTTGGAAATATTTTTTCATGAACTGTCCATGTATGAAGAGAAAATTTTTCTCAAAAGATATGAGCTGAAGCAGGATTTGTTGCAGAAACTAGATGACCGCCTTTTTAATGAAGACCGTCCATATGACAGAGTAAGACTGGGATTACCGGGATGGAAATCCCGGTTCCACAGGGAATATTTTGGTGTGGAAACTTCTAATGAAATTGAAAAGCTGCAGAATGACATGGCTGAGAAGTATTTAGAAGGACTTTGCTGGGTGTTTCAATGCTATTTTGCAGGCGTACCATCATGGAGCTGGTACTATCCATTCTACGTTGCTCCTTTCGTATCTGATCTCAAGGGTCTTGCTCGGTTTCAGATATCTTTCACTGTGGACAAACCACTACGACCATTTGATCAGCTCATGGCAGTTTTGCCATTACCAAGCTGGTGCGCTCTCCCAAAATGTTACCACTGGAACTTTATGGGACGTCGAGAAGATGACTATCCGAAGTTGCAGACTGACACGAACGGGAAACGTTTCTTGTGGAGTGGTATCTCTGAGGAACTGCTGCTTTCTGCCACTGAAGCGGTAGATGAGAAGCTGACGATGGATGAGGTGAGACGGAATACTACTCGGCAAGACAAGGTCTTTCTGCACAGGAACTCAAACGCTCTGGCACATATCAAAGAAGTTGTTGTACAGACAACATACTGTTCAGCGCAGAAGCTTCCGATAGATTCAGCTACGAGTGGAATCGGGGGGTGGTTGTCGCCTGATGACAATGATGGCTTGAGCAACAGTTTCTTTCCCTCGCCCATAAAAAATCTGCAGGACATCACAAATGATCAGGCAATATCAGCCATGTTCTTCAATCCTGAGGTAGGGAATCCAATTACAAGGCTACTTAGCGATGTCAGAGTACCTGAGAAGACTGTTTCGGGAGCTGACATCTCAAAGAGGCCACTCTGGCACACGTACCCGGGCTCAAGGCCGCCACCGCCCATCGTTCAGAGGCCGGATTCTATCTGGAAGCCGAGCACGCCGGTGACGCCGCGGGAAGAGCACAAGAACGCCGGAACGGGGTGGATGGGGCGGGGCAGAGGGAATAATGCCATTGCCGCCGCCCAGGCGAAGCTCGCCAGGAGCAGCAGCTACGGGCATGGCACTGCCACCGACACGCCACGGAGCAGCAGCAGCAGCAGCTACAGCTATAGGAAAGGTTTCCATCGGGTGGACATGCCGCATAGCAGAGGAAGCAACAGCAGGTTTGACAACGATGGGGGAGGTGCACCGTGGACTGGGGGAGGCGGCGGCGGCGACCATGCCGCGAGTGCGCAGCCACGTCGTTGGTAG |
| Protein: MGIPSFYKWLVTRYPSIVSPAKEEPEEGIIFHNLYLDMNCIIHPCFHPQDQMHADVDVCPPTTVSEVLESMFEHLDRLFRIIRPTRLLYLAVDGVVPCAKMNRVRRGRFYSAMLATSEALEEEKMRRELREQGKEVPPREISEVSDSNVITPGTEFMEKLSQALEYYTRYKLNTDPGWKDIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLYGHDADLIMLALASHEVHFSILREGVLLPNQAETEGNSDKPYLFLNIWVLREYLELDLKILDPICEPDIERLIDDFIFICFLMGNDFIPHIPSLETHEGAVHLLLEVYKTTFNKMGGYIVNTDKVKDKHGAYLEVSRLEIFFHELSMYEEKIFLKRYELKQDLLQKLDDRLFNEDRPYDRVRLGLPGWKSRFHREYFGVETSNEIEKLQNDMAEKYLEGLCWVFQCYFAGVPSWSWYYPFYVAPFVSDLKGLARFQISFTVDKPLRPFDQLMAVLPLPSWCALPKCYHWNFMGRREDDYPKLQTDTNGKRFLWSGISEELLLSATEAVDEKLTMDEVRRNTTRQDKVFLHRNSNALAHIKEVVVQTTYCSAQKLPIDSATSGIGGWLSPDDNDGLSNSFFPSPIKNLQDITNDQAISAMFFNPEVGNPITRLLSDVRVPEKTVSGADISKRPLWHTYPGSRPPPPIVQRPDSIWKPSTPVTPREEHKNAGTGWMGRGRGNNAIAAAQAKLARSSSYGHGTATDTPRSSSSSSYSYRKGFHRVDMPHSRGSNSRFDNDGGGAPWTGGGGGGDHAASAQPRRW |